CDS

Accession Number TCMCG007C27233
gbkey CDS
Protein Id XP_018514166.1
Location join(13127513..13127671,13127760..13127807,13127881..13127952,13128033..13128721,13128823..13128973,13129060..13129283,13129371..13129502,13129635..13129725,13129853..13129900,13130007..13130135,13130218..13130295,13130384..13130578)
Gene LOC103864466
GeneID 103864466
Organism Brassica rapa

Protein

Length 671aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_018658650.2
Definition histone-lysine N-methyltransferase CLF isoform X3 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category K
Description Histone-lysine N-methyltransferase
KEGG_TC -
KEGG_Module -
KEGG_Reaction R03875        [VIEW IN KEGG]
R03938        [VIEW IN KEGG]
R04866        [VIEW IN KEGG]
R04867        [VIEW IN KEGG]
KEGG_rclass RC00003        [VIEW IN KEGG]
RC00060        [VIEW IN KEGG]
RC00181        [VIEW IN KEGG]
RC00496        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K11430        [VIEW IN KEGG]
EC 2.1.1.43        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00310        [VIEW IN KEGG]
ko05206        [VIEW IN KEGG]
map00310        [VIEW IN KEGG]
map05206        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005677        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006342        [VIEW IN EMBL-EBI]
GO:0006349        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006479        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008170        [VIEW IN EMBL-EBI]
GO:0008213        [VIEW IN EMBL-EBI]
GO:0008276        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009292        [VIEW IN EMBL-EBI]
GO:0009294        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009965        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016278        [VIEW IN EMBL-EBI]
GO:0016279        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016571        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0017053        [VIEW IN EMBL-EBI]
GO:0018022        [VIEW IN EMBL-EBI]
GO:0018024        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031519        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034968        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0040030        [VIEW IN EMBL-EBI]
GO:0042054        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044092        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044764        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0045857        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048586        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070734        [VIEW IN EMBL-EBI]
GO:0071514        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090568        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000028        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAACACCGAACATCTTATACAGGCAAGATATGAAGTGCTTATGAAGGAAAAAGAAGTTTCAGAGAGTGGCGATAATCAAGCAGAGAGTTCTCTTCTTAACAAAGATATGGATGGAGCTTTGGATTCTTTCGACAACCTGTTCTGCCGTCGATGCCTTGTGTTTGATTGCCGGCTGCACGGGTGTTCGCAGGATCTTATATTTCCTGCTGAGAAACCAGCTCCATGGACTCCTCCTGTGGATGAAAATCTAACCTGTGGCGCTAACTGCTATAAAACGCTTCTCAAATCTAATAGAATCCCAGCTAATGGCACCACCGAAGATAAAACTGGCACTTCATCAGATGGTGCGGGTACTAAAACCACATCCAAGTTCTCCGGCAAACTTAATAGGAAAAAAACAAAAACCTTCCCTAGCGAAAGCGCGTCGTCTAATGAAAAATGCACGCCAGAAACAAGTGACTCAGAGAACGGCGTTCAGCAGGATACCAATCCTGAGAAAGTTTCATCGACATCAAAGGTGAAAGCTAGTGGGAGACGTGGAGGTCGTAAGAGGAACAACAACCGAGTTGCTGAGCGAGTTTCTCGTAGGACTCAAAAGAGGCAAAAGAAGTCAGAAGCTTCCGATACTGATTCCATCGCCACTGGGAGTCGTTCAGCAAGCGATGCAAAACATAAAGATAATGAAGATGCTACATCCTCTTCTCAGAAGCATGTAAAATCTGGGAGCTCTAAGAATTCAAGAAAGAATGACACTCCTGTAGATGACTCCAAGAATTCTGTGAAGGGTGACGATCCTGTTTCTCAGTTAAATGCTGTTGCATCTGAACCGTGTAGCGATGGAAGTTTAAGGAAAGAAGAGTTTGTGGGTGAAAATGTATGTCCAGGAGGACTGTCTGAAGATAAATCGTGGAGACCACTTGAGAAAAGCCTGTTCCAAAAAGGTGTTGAGATTTTTGGAATGAATAGCTGCATGATTGCTAGGAACCTTCTGTGTGGTCTCAAGTCGTGTTGGGAGGTCTTCCAATACATGACTTGCTCGGAGAACAAAGCTTCCTTCTTCGGAGGTGATGCATTGAATCCCGACGGCTCTTCCAAGTTTGATATCAATGGAAATATGACTAATAACCAAGTGCGAAGAAGGTCAAGATTTCTACGTAGAAGAGGCAAAGTGCGCCGCTTGAAGTATACTTGGAAGTCTGCTGCATATCATTCAATTAGGAAAAGAAGTACCGATAAGAAAGACCAGCCGTGCCGTCAATTTAATCCATGCAACTGCAAAACTGCTTGCGGGAAGGAATGTACTTGTTTGCTAAACGGGACTTGCTGCGAGAAGTACTGCGGTTGCCCAAAGAGCTGCAAGAACAGGTTTAGAGGTTGTCATTGTGCCAAAAGCCAGTGTCGGAGCCGTCAATGTCCGTGCTTTGCTGCAGATCGGGAATGTGATCCTGATGTTTGTAGGAATTGCTGGGTCATTGGTGGGGATGGTACGCTTGGGGTCCCTAGCCAAAGAGGCGATAATTATGAGTGCAGGAATATGAAATTACTCCTGAAACAACAACAAAGGGTTTTACTTGGAATATCTGATGTATCTGGTTGGGGAGCTTTCCTAAAGAACAGTGTAAGTAAACACGAATATCTCGGGGAATACACAGGAGAGCTGATATCACATAAAGAAGCAGATAAACGAGGGAAGATATATGATCGCGAGAATTCCTCTTTTCTCTTTAATCTAAATGATCAGTTTGTGCTAGATGCTTATAGGAAAGGAGACAAACTGAAGTTCGCCAATCATTCCCCTGAACCTAACTGTTACGCAAAGGTCATTATGGTTGCTGGAGATCATAGAGTGGGTATTTTTGCAAAGGAGAGGATATTGGCTGGAGAAGAACTGTTTTATGATTACAGGTATGAGCCAGATCGAGCTCCTGCTTGGGCCAGAAAACCTGAAGCTTCAGGTTCTAAGAAAGATGAGAATGTTACACCTTCTGTTGGTAGACCCAAGAAGGTTGCTTAG
Protein:  
MNTEHLIQARYEVLMKEKEVSESGDNQAESSLLNKDMDGALDSFDNLFCRRCLVFDCRLHGCSQDLIFPAEKPAPWTPPVDENLTCGANCYKTLLKSNRIPANGTTEDKTGTSSDGAGTKTTSKFSGKLNRKKTKTFPSESASSNEKCTPETSDSENGVQQDTNPEKVSSTSKVKASGRRGGRKRNNNRVAERVSRRTQKRQKKSEASDTDSIATGSRSASDAKHKDNEDATSSSQKHVKSGSSKNSRKNDTPVDDSKNSVKGDDPVSQLNAVASEPCSDGSLRKEEFVGENVCPGGLSEDKSWRPLEKSLFQKGVEIFGMNSCMIARNLLCGLKSCWEVFQYMTCSENKASFFGGDALNPDGSSKFDINGNMTNNQVRRRSRFLRRRGKVRRLKYTWKSAAYHSIRKRSTDKKDQPCRQFNPCNCKTACGKECTCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVIGGDGTLGVPSQRGDNYECRNMKLLLKQQQRVLLGISDVSGWGAFLKNSVSKHEYLGEYTGELISHKEADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPEPNCYAKVIMVAGDHRVGIFAKERILAGEELFYDYRYEPDRAPAWARKPEASGSKKDENVTPSVGRPKKVA